CDS

Accession Number TCMCG016C12619
gbkey CDS
Protein Id OMO79721.1
Location complement(join(48535..48680,49089..49137,49400..49473,49863..49920,50099..50167,50431..50552,50634..50749,50829..50890,50970..51021,51112..51196,51403..51514,51630..51707,51794..51969,52077..52127,52233..52344))
Organism Corchorus capsularis
locus_tag CCACVL1_13461

Protein

Length 453aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010360.1
Definition DNA primase, small subunit [Corchorus capsularis]
Locus_tag CCACVL1_13461

EGGNOG-MAPPER Annotation

COG_category L
Description Belongs to the eukaryotic-type primase small subunit family
KEGG_TC -
KEGG_Module M00261        [VIEW IN KEGG]
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K02684        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003896        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005658        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006269        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGAAAGAGGAAGCTGCAAACGGAAGAGATGACATGATTATTGACGGACCTGAGCAAGCAAACGCCGTTCCCGACGGCTTCAATGCTAACTATCTCAGAATTTACTACGGAAAGTTATTTCCTCATGCGGATATCTTCAAGTGGTTATCTTACGGAAATGATGGCAAGCATCCTGCTTGTGACAAGTCCTATGTTGGAAGAAGGGAATTTTCTTTCACACTGGAAAATGACATTTATATCCGATTCCAGTCTTTCAATAGTGTTTCTGAGATGGAAAATTCCATCAAGGAGAAGTGTCCATTCAAGATAGATATTGGGCCTGTCTACAGTGTTGATCCTGCAAAGAGGCATGCCTATGCGCAAAGTGGTGACAATGTCTTCACTCCAGTTGAGAGGGAACTGGTTTTTGATATTGATATAACAGATTATGATGATGTTAGATATTGCTGCACAGGAGCTGATGTTTGCTTGGAATGCTGGCCTCTAATGACAATAGCAATTAAAGTGATTGATACAGCTCTCAGAGATGACTTTGGTTTTAATCACATTCTCTGGGCATACAGTGGTCGACGTGGTGTGCACTGCTGGGTTTGTGATGGGAAAGCCAGAAGGCTAACTAATGAACAGAGGGCAGCTATTGCTGACTATTTCCGTGTATACAAGGGCAATGAAAATAGTAACAAAAAAGTATCTTTACCAGGCCTTGTTCTTCATCCTTTCCTGGCGAGATCCTATACTGAAGTTCTGAAGGGCTTTTTTGAGGGAAAACTACTTTCAAACCAAAATTTACTTTCATCTGAGGAGAGATATGAGAAGATCCTAGAAATGATTCCTGATGCATCTGTAACTTCTGAGCTTAGGGGGAGGTGGCAAGACAATAAGCGATCTTCCATGTCAAAAGATGACATTAACATTGTTAGATGGGAGCAACTAAAGCAAATCCTGCAATCAGGAAAACAAAAGGCACAAGGGCTACGGAGATGTGTTGAAGAGATAGTCTTTTCTTATACGTACCCTAGGCTCGATATGGAGGTTTCAAAGCACATGAACCATTTACTGAAGGCACCATTTTGTGTACATCCTAAAACAGGTCGTGTTTGTGTTCCGATTGACCCAAACAATTGTGATGAGTTTGATCCAACTACAGTGCCAACCCTATCCCAGCTGCTGGAAGAACTAAACAAAGGAGGATTGAGACAAGATGCTGAAAATGGATGGGAAAGAACCTCACTTGGAGAGTCAATCGCGTTTTTCAGATCATCATTCTTACAACCTCTGCTAAAATCTTGCAAGGAAGAGATAGAAAGTTCTTATAACGCAAAGCTGCAGCAGTCCAAGAATAATACTCTCAGCTGGTAG
Protein:  
MTKEEAANGRDDMIIDGPEQANAVPDGFNANYLRIYYGKLFPHADIFKWLSYGNDGKHPACDKSYVGRREFSFTLENDIYIRFQSFNSVSEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCTGADVCLECWPLMTIAIKVIDTALRDDFGFNHILWAYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSNKKVSLPGLVLHPFLARSYTEVLKGFFEGKLLSNQNLLSSEERYEKILEMIPDASVTSELRGRWQDNKRSSMSKDDINIVRWEQLKQILQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNNCDEFDPTTVPTLSQLLEELNKGGLRQDAENGWERTSLGESIAFFRSSFLQPLLKSCKEEIESSYNAKLQQSKNNTLSW